Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3815
Gene Symbol: KIT
KIT
1.000 Biomarker group BEFREE Our findings suggest that combinatorial inhibition of CK2 and KIT warrants evaluation as a novel therapeutic strategy in GIST, especially in imatinib-resistant GIST. 31776458 2020
Entrez Id: 3815
Gene Symbol: KIT
KIT
1.000 GeneticVariation group BEFREE This case illustrates that knowing the specific type of KIT mutations may uncover resistance of certain GIST's to TKIs, necessitating more targeted and alternative therapy. 31702819 2020
Entrez Id: 3815
Gene Symbol: KIT
KIT
1.000 GeneticVariation group BEFREE Additional genetic events including RB1, SMARCB1, and MAX except secondary KIT/PDGFRA mutations are the most common for GISTs to evolve into resistant disease. 31758409 2020
Entrez Id: 3815
Gene Symbol: KIT
KIT
1.000 GeneticVariation group BEFREE Gastrointestinal stromal tumors (GISTs) are one of the most common mesenchymal tumor types and usually contain KIT or PDGFRA mutations. 31570771 2020
Entrez Id: 3815
Gene Symbol: KIT
KIT
1.000 Biomarker group BEFREE WEE1 inhibition could promote KIT autophagic degradation and, therefore, targeting WEE1 might represent a novel strategy for GIST therapies. 31197522 2020
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.800 GeneticVariation group BEFREE Activating mutation of KIT or PDGFRA is the primary molecular mechanism for gastrointestinal stromal tumors (GISTs). 31197522 2020
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.800 GeneticVariation group BEFREE Gastrointestinal stromal tumors (GISTs) are one of the most common mesenchymal tumor types and usually contain KIT or PDGFRA mutations. 31570771 2020
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.800 GeneticVariation group BEFREE Most gastrointestinal stromal tumours (GIST) are driven by activating oncogenic mutations of KIT/PDGFRA, which provide a compelling therapeutic target. 31776458 2020
Entrez Id: 55107
Gene Symbol: ANO1
ANO1
0.100 Biomarker group BEFREE GISTs with predominant epithelioid cell morphology may pose a diagnostic dilemma therefore in all suspected cases of GIST, immunocytochemistry for c-Kit and/or DOG1 should be employed on cell block preparations to confirm the diagnosis of GIST. 31698512 2020
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 AlteredExpression group BEFREE High-grade GISTs were more likely to have lower CD34 expression and a higher Ki-67 proliferation index compared to the matched low-grade tumors. 31570771 2020
Entrez Id: 2115
Gene Symbol: ETV1
ETV1
0.100 AlteredExpression group BEFREE ETV1 is a member of the ETS family of transcription factors, already known oncogenic drivers in Ewing sarcoma, prostate cancer and gastrointestinal stromal tumors, but not in gliomas. 31381204 2020
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.100 AlteredExpression group BEFREE Coordinated inhibition of CK2 and KIT by CX4945 (or CK2 shRNA) and imatinib, respectively, leads to increased apoptosis, anti-proliferative effects and cell cycle arrest and decreased p-AKT and p-S6 expression, migration and invasiveness in all GIST cell lines compared with either intervention alone, indicating additive effects of inhibiting these two important regulators of GIST biology. 31776458 2020
Entrez Id: 3320
Gene Symbol: HSP90AA1
HSP90AA1
0.080 Biomarker group BEFREE Our previous studies showed that CDC37, regulated by casein kinase 2 (CK2), is a crucial HSP90 cofactor for KIT oncogenic function and a promising and more selective therapeutic target in GIST. 31776458 2020
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.050 Biomarker group BEFREE 18F-FDG PET/CT seems to be an accurate method for detection and localization of local and distant recurrence in GIST with good sensitivity and specificity and significant impact on clinical decision-making. 31646354 2020
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.050 Biomarker group BEFREE Multiparametric MRI and <sup>18</sup>F-FDG PET features for differentiating gastrointestinal stromal tumors from benign gastric subepithelial lesions. 31781931 2020
Entrez Id: 4149
Gene Symbol: MAX
MAX
0.040 GeneticVariation group BEFREE Additional genetic events including RB1, SMARCB1, and MAX except secondary KIT/PDGFRA mutations are the most common for GISTs to evolve into resistant disease. 31758409 2020
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.030 GeneticVariation group BEFREE Alterations in cell cycle regulation-associated genes, such as genetic mutations and MYC copy number gain, may promote primary progression from low-grade GISTs to high-grade tumors by regulating tumor cell proliferation. 31570771 2020
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.020 GeneticVariation group BEFREE Additional genetic events including RB1, SMARCB1, and MAX except secondary KIT/PDGFRA mutations are the most common for GISTs to evolve into resistant disease. 31758409 2020
Entrez Id: 7465
Gene Symbol: WEE1
WEE1
0.010 AlteredExpression group BEFREE Upregulated WEE1 expression was observed in GIST tissues and correlated with tumor size, mitotic count, and risk grade. 31197522 2020
Entrez Id: 4585
Gene Symbol: MUC4
MUC4
0.010 GeneticVariation group BEFREE All tumors were positive for vimentin, CD99 and cytokeratin (patchy), while negative for markers of solid pseudopapillary neoplasm, neuroendocrine, acinar, myogenic/rhabdoid, vascular, melanocytic, or lymphoid differentiation, gastrointestinal stromal tumor as well as MUC4. 31383964 2020
Entrez Id: 23269
Gene Symbol: MGA
MGA
0.010 GeneticVariation group BEFREE WES identified 30 differential cancer-associated genes mutated only in high-grade GISTs; Sanger sequencing confirmed ten relevant differential oncogenic mutations in nine genes (MGA, ARID1A, LATS2, MAX, PIK3CA, RB1, RPS6KB2, SDHA, and SETD2). 31570771 2020
Entrez Id: 149420
Gene Symbol: PDIK1L
PDIK1L
0.010 Biomarker group BEFREE Our findings suggest that combinatorial inhibition of CK2 and KIT warrants evaluation as a novel therapeutic strategy in GIST, especially in imatinib-resistant GIST. 31776458 2020
Entrez Id: 11140
Gene Symbol: CDC37
CDC37
0.010 Biomarker group BEFREE Treatment with a specific CK2 inhibitor, CX4945, leads to CDC37 dephosphorylation and inhibits KIT signalling in imatinib-sensitive and in imatinib-resistant GIST cell lines. 31776458 2020
Entrez Id: 55726
Gene Symbol: INTS13
INTS13
0.010 Biomarker group BEFREE Histologies were; Gastrointestinal stromal tumors (7), desmoid (4), spindle cell tumor (2), dedifferentiated liposarcoma (2), and nonseminomatous germ cell tumor (1). 31846095 2020
Entrez Id: 3815
Gene Symbol: KIT
KIT
1.000 GeneticVariation group BEFREE We tested the activity of avapritinib, a potent and highly selective inhibitor of mutated KIT and PDGFRA, in three patient-derived xenograft (PDX) GIST models carrying different <i>KIT</i> mutations, with differential sensitivity to standard TKI.<b>Experimental Design:</b> NMRI <i>nu/nu</i> mice (<i>n</i> = 93) were transplanted with human GIST xenografts with <i>KIT</i> exon 11+17 (UZLX-GIST9 <i> 30274985 2019